Emergency mode after failing to mount

I have a similar issue, and I don't dual boot all I have is Garuda installed.

Not sure what happened, but after updating my system, I end up in emergency mode after failing to mount just about everything including networking and other things. When I try rebooting the system, it gets stuck in an endless loop of ATA005 or something. I have to use the power button to restart the computer.

Snapshots also end up with the same issue or just freeze.

I did chroot but I am unable to update due to a

bus error / bus error (core dump)

with btrfs check --force --repair /dev/sda2 I get


Checking filesystem on /dev/sda2
UUID: 9e7734ad-4c3a-4599-bf16-6f73c8b1b2b7
[1/7] checking root items
Error reading 4055646699520, -1
Error reading 4055646699520, -1
bad tree block 4055646699520, bytenr mismatch, want=4055646699520, have=0
ERROR: failed to repair root items: Input/output error

Without the --repair flag I get a whole bunch of read or csum mismatch errors

I am unable to copy a lot of the files in my home directory due to could not read file errors. However, the files are not corrupt the system just won't allow me to copy them. I suspect Garuda treats them a read-only and will not even allow the root to change the permissions. I checked the SSD (Crucial MX500) in Windows using Crucial's disk utility and it says the drive is healthy.

Guessing I will have to re-install too.

[🔴] × garuda-inxi
System:
Kernel: 6.2.13-zen-1-zen arch: x86_64 bits: 64 compiler: gcc v: 12.2.1
parameters: BOOT_IMAGE=/boot/vmlinuz-x86_64 lang=en_US keytable=us tz=UTC
misobasedir=garuda root=miso:LABEL=GARUDA_DR460NIZEDGAMING_RAPTOR quiet
systemd.show_status=1 ibt=off driver=free nouveau.modeset=1
i915.modeset=1 radeon.modeset=1
Desktop: KDE Plasma v: 5.27.4 tk: Qt v: 5.15.9 wm: kwin_x11 vt: 1 dm: SDDM
Distro: Garuda Linux base: Arch Linux
Machine:
Type: Desktop System: Gigabyte product: X570 AORUS MASTER v: -CF
serial: <superuser required>
Mobo: Gigabyte model: X570 AORUS MASTER serial: <superuser required>
UEFI: American Megatrends LLC. v: F37b date: 02/08/2023
Battery:
Device-1: hidpp_battery_0 model: Logitech Craft Advanced Keyboard
serial: <filter> charge: 55% (should be ignored) rechargeable: yes
status: discharging
Device-2: hidpp_battery_1 model: Logitech Wireless Mouse MX Master 3
serial: <filter> charge: 100% (should be ignored) rechargeable: yes
status: discharging
CPU:
Info: model: AMD Ryzen 9 3950X bits: 64 type: MT MCP arch: Zen 2 gen: 3
level: v3 note: check built: 2020-22 process: TSMC n7 (7nm)
family: 0x17 (23) model-id: 0x71 (113) stepping: 0 microcode: 0x8701030
Topology: cpus: 1x cores: 16 tpc: 2 threads: 32 smt: enabled cache:
L1: 1024 KiB desc: d-16x32 KiB; i-16x32 KiB L2: 8 MiB desc: 16x512 KiB
L3: 64 MiB desc: 4x16 MiB
Speed (MHz): avg: 3511 high: 3710 min/max: 2200/4761 boost: enabled
scaling: driver: acpi-cpufreq governor: performance cores: 1: 3500 2: 3599
3: 3500 4: 3500 5: 3500 6: 3500 7: 3600 8: 3500 9: 3469 10: 3500 11: 3500
12: 3500 13: 3500 14: 3500 15: 3500 16: 3710 17: 3500 18: 3500 19: 3500
20: 3500 21: 3500 22: 3500 23: 3500 24: 3500 25: 3500 26: 3500 27: 3500
28: 3500 29: 3500 30: 3500 31: 3500 32: 3500 bogomips: 224015
Flags: avx avx2 ht lm nx pae sse sse2 sse3 sse4_1 sse4_2 sse4a ssse3 svm
Vulnerabilities: <filter>
Graphics:
Device-1: Blackmagic Design DeckLink Quad HDMI Recorder driver: N/A pcie:
gen: 3 speed: 8 GT/s lanes: 4 link-max: lanes: 8 bus-ID: 04:00.0
chip-ID: bdbd:a14e class-ID: 0400
Device-2: AMD Vega 20 [Radeon VII] driver: amdgpu v: kernel arch: GCN-5
code: Vega process: GF 14nm built: 2017-20 pcie: gen: 3 speed: 8 GT/s
lanes: 16 ports: active: HDMI-A-1 empty: DP-1,DP-2,DP-3 bus-ID: 0d:00.0
chip-ID: 1002:66af class-ID: 0300
Display: x11 server: X.Org v: 21.1.8 with: Xwayland v: 23.1.1
compositor: kwin_x11 driver: X: loaded: amdgpu unloaded: modesetting,radeon
alternate: fbdev,vesa dri: radeonsi gpu: amdgpu display-ID: :0 screens: 1
Screen-1: 0 s-res: 3840x2160 s-dpi: 96 s-size: 1016x571mm (40.00x22.48")
s-diag: 1165mm (45.88")
Monitor-1: HDMI-A-1 mapped: HDMI-A-0 model: Onkyo AV Receiver built: 2016
res: 3840x2160 hz: 60 dpi: 52 gamma: 1.2 size: 1872x1053mm (73.7x41.46")
diag: 1630mm (64.2") ratio: 16:9 modes: max: 3840x2160 min: 640x480
API: OpenGL v: 4.6 Mesa 23.0.3 renderer: AMD Radeon VII (vega20 LLVM
15.0.7 DRM 3.49 6.2.13-zen-1-zen) direct-render: Yes
Audio:
Device-1: Blackmagic Design DeckLink Quad HDMI Recorder driver: N/A pcie:
gen: 3 bus-ID: 5-2:2 chip-ID: b58e:9e84 speed: 8 GT/s lanes: 4
class-ID: 0300 serial: <filter> link-max: lanes: 8 bus-ID: 04:00.0
chip-ID: bdbd:a14e class-ID: 0400
Device-2: AMD Vega 20 HDMI Audio [Radeon VII] driver: snd_hda_intel
v: kernel pcie: gen: 3 speed: 8 GT/s lanes: 16 bus-ID: 0d:00.1
chip-ID: 1002:ab20 class-ID: 0403
Device-3: AMD Starship/Matisse HD Audio vendor: Gigabyte
driver: snd_hda_intel v: kernel pcie: gen: 4 speed: 16 GT/s lanes: 16
bus-ID: 0f:00.4 chip-ID: 1022:1487 class-ID: 0403
Device-4: Blue Microphones Yeti Stereo Microphone type: USB
driver: hid-generic,snd-usb-audio,usbhid
Device-5: Nam Tai E&E Products or OmniVision Sony Playstation Eye
type: USB driver: ov534,snd-usb-audio bus-ID: 5-4:4 chip-ID: 1415:2000
class-ID: 0102
API: ALSA v: k6.2.13-zen-1-zen status: kernel-api with: aoss
type: oss-emulator tools: N/A
Server-1: PipeWire v: 0.3.70 status: active with: 1: pipewire-pulse
status: active 2: wireplumber status: active 3: pipewire-alsa type: plugin
4: pw-jack type: plugin tools: pactl,pw-cat,pw-cli,wpctl
Network:
Device-1: Intel Wi-Fi 6 AX200 driver: iwlwifi v: kernel pcie: gen: 2
speed: 5 GT/s lanes: 1 bus-ID: 05:00.0 chip-ID: 8086:2723 class-ID: 0280
IF: wlp5s0 state: down mac: <filter>
Device-2: Intel I211 Gigabit Network vendor: Gigabyte driver: igb
v: kernel pcie: gen: 1 speed: 2.5 GT/s lanes: 1 port: e000 bus-ID: 06:00.0
chip-ID: 8086:1539 class-ID: 0200
IF: enp6s0 state: down mac: <filter>
Device-3: Realtek RTL8125 2.5GbE vendor: Gigabyte driver: r8169 v: kernel
pcie: gen: 2 speed: 5 GT/s lanes: 1 port: d000 bus-ID: 07:00.0
chip-ID: 10ec:8125 class-ID: 0200
IF: enp7s0 state: up speed: 1000 Mbps duplex: full mac: <filter>
Device-4: Microsoft Xbox Wireless Adapter for Windows type: USB
driver: mt76x2u bus-ID: 3-6.3:4 chip-ID: 045e:02fe class-ID: 0000
serial: <filter>
IF: wlp8s0f3u6u3 state: down mac: <filter>
Bluetooth:
Device-1: Intel AX200 Bluetooth type: USB driver: btusb v: 0.8 bus-ID: 3-5:2
chip-ID: 8087:0029 class-ID: e001
Report: bt-adapter ID: hci0 rfk-id: 0 state: up address: <filter>
Drives:
Local Storage: total: 11.85 TiB used: 6.49 TiB (54.8%)
SMART Message: Unable to run smartctl. Root privileges required.
ID-1: /dev/nvme0n1 maj-min: 259:0 vendor: Western Digital
model: WDS100T1XHE-00AFY0 size: 931.51 GiB block-size: physical: 512 B
logical: 512 B speed: 63.2 Gb/s lanes: 4 type: SSD serial: <filter>
rev: 614600WD temp: 38.9 C
ID-2: /dev/sda maj-min: 8:0 vendor: Crucial model: CT2000MX500SSD1
size: 1.82 TiB block-size: physical: 4096 B logical: 512 B speed: 6.0 Gb/s
type: SSD serial: <filter> rev: 010 scheme: GPT
ID-3: /dev/sdc maj-min: 8:32 vendor: Crucial model: CT1000MX500SSD1
size: 931.51 GiB block-size: physical: 4096 B logical: 512 B speed: 6.0 Gb/s
type: SSD serial: <filter> rev: 010
ID-4: /dev/sdd maj-min: 8:48 vendor: Samsung model: SSD 860 QVO 2TB
size: 1.82 TiB block-size: physical: 512 B logical: 512 B speed: 6.0 Gb/s
type: SSD serial: <filter> rev: 1B6Q
ID-5: /dev/sde maj-min: 8:64 type: USB vendor: SanDisk model: Ultra Fit
size: 28.64 GiB block-size: physical: 512 B logical: 512 B type: N/A
serial: <filter> rev: 1.00 scheme: MBR
SMART Message: Unknown USB bridge. Flash drive/Unsupported enclosure?
ID-6: /dev/sdf maj-min: 8:80 type: USB vendor: Western Digital
model: WD40NDZW-11MR8S1 size: 3.64 TiB block-size: physical: 4096 B
logical: 512 B type: HDD rpm: 5400 serial: <filter> rev: 4008 scheme: GPT
ID-7: /dev/sdg maj-min: 8:96 type: USB vendor: Western Digital
model: WD10SDZW-11UMGS0 size: 931.48 GiB block-size: physical: 512 B
logical: 512 B type: HDD rpm: 5400 serial: <filter> rev: 1021 scheme: GPT
ID-8: /dev/sdh maj-min: 8:112 type: USB vendor: Western Digital
model: WD20SDZW-11JJ8S0 size: 1.82 TiB block-size: physical: 512 B
logical: 512 B type: HDD rpm: 5400 serial: <filter> rev: 1021 scheme: GPT
Partition:
Message: No partition data found.
Swap:
Kernel: swappiness: 133 (default 60) cache-pressure: 100 (default)
ID-1: swap-1 type: zram size: 62.71 GiB used: 0 KiB (0.0%) priority: 100
dev: /dev/zram0
Sensors:
System Temperatures: cpu: 48.9 C mobo: N/A gpu: amdgpu temp: 38.0 C
mem: 35.0 C
Fan Speeds (RPM): N/A gpu: amdgpu fan: 937
Info:
Processes: 526 Uptime: 1h 53m wakeups: 37 Memory: 62.72 GiB
used: 7.18 GiB (11.5%) Init: systemd v: 253 default: graphical
tool: systemctl Compilers: gcc: 12.2.1 Packages: pm: pacman pkgs: 1821
libs: 519 tools: octopi,paru Shell: fish v: 3.6.1 default: Bash v: 5.1.16
running-in: konsole inxi: 3.3.26
warning: database file for 'garuda' does not exist (use '-Sy' to download)
warning: database file for 'core' does not exist (use '-Sy' to download)
warning: database file for 'extra' does not exist (use '-Sy' to download)
warning: database file for 'community' does not exist (use '-Sy' to download)
warning: database file for 'multilib' does not exist (use '-Sy' to download)
warning: database file for 'chaotic-aur' does not exist (use '-Sy' to download)
Garuda (2.6.16-1):
System install date:     2023-05-11
Last full system update: 2023-05-11 ↻
Is partially upgraded:   No
Relevant software:       snapper NetworkManager dracut
Windows dual boot:       <superuser required>
Failed units:            snapper-cleanup.service

It's not a good idea to post your problem in a "solved" thread, so I've moved your post.
But reinstalling is not a real solution.

Maybe a hardware problem?

2 Likes

Thanks. Yeah, I am wondering the same thing, like maybe the drive is about to die.

I have been trying to recover as much of the data as I can and see how I can get blocks repaired. So far anything larger than 100mb has issues being copied.

As for reinstall, I had been thinking about doing a clean install for a few weeks now because I wanted to return to normal mesa and stop using the mesa-git I installed but there are just too many dependencies that it felt easier just to do a clean install. Anyway, I decided not to after the amdgpu-pro drivers temporarily when off the AURs.

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